OakVar MCP Server

OakVar is a genomic variant annotation platform. While it is powerful, it is raw data-heavy. Without genomics background, OakVar annotation result can be difficult to tackle. This MCP server helps understanding it. This MCP server acts like a shield between your genome data and LLM chat services. Questions like "how many rare variants do I have?" don't need uploading your entire genome data to AI services. In the example, this MCP server will provide just a number and the chat service will use only that number. However, questions which need to retrieve specifics of variants will result in those retrieved variants being included in the input context to chat services. To prevent this situation, local LLM chats should be used. It's free right now. Let me know what you think. If you are not familiar with OakVar, it's at https://oakvar.com.